Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
UPK1AO00322 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
UPK1AO00322 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1AO00322 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.12■□□□□ 0.01
UPK1AO00322 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.12■□□□□ 0.01
UPK1AO00322 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.12■□□□□ 0.01
UPK1AO00322 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
UPK1AO00322 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
UPK1AO00322 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1AO00322 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.12■□□□□ 0.01
UPK1AO00322 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
UPK1AO00322 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1AO00322 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1AO00322 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1AO00322 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
UPK1AO00322 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1AO00322 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1AO00322 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1AO00322 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1AO00322 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1AO00322 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1AO00322 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1AO00322 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
UPK1AO00322 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.12■□□□□ 0.01
UPK1AO00322 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.12■□□□□ 0.01
UPK1AO00322 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1AO00322 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.12■□□□□ 0.01
UPK1AO00322 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1AO00322 MIR3687-2-201ENST00000577708 61 ntBASIC15.12■□□□□ 0.01
UPK1AO00322 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1AO00322 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.12■□□□□ 0.01
UPK1AO00322 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.12■□□□□ 0.01
UPK1AO00322 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.12■□□□□ 0.01
UPK1AO00322 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.12■□□□□ 0.01
UPK1AO00322 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
UPK1AO00322 MIR3687-1-201ENST00000614492 61 ntBASIC15.12■□□□□ 0.01
UPK1AO00322 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1AO00322 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1AO00322 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
UPK1AO00322 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
UPK1AO00322 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1AO00322 UXT-AS1-201ENST00000590504 1525 ntBASIC15.12■□□□□ 0.01
UPK1AO00322 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK1AO00322 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK1AO00322 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
UPK1AO00322 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK1AO00322 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK1AO00322 AC007292.2-201ENST00000593524 1812 ntBASIC15.11■□□□□ 0.01
UPK1AO00322 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK1AO00322 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.11■□□□□ 0.01
UPK1AO00322 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.11■□□□□ 0.01
UPK1AO00322 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK1AO00322 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 FAM220BP-201ENST00000377689 816 ntBASIC15.11■□□□□ 0.01
UPK1AO00322 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.11■□□□□ 0.01
UPK1AO00322 UPF3AP3-201ENST00000420996 769 ntBASIC15.11■□□□□ 0.01
UPK1AO00322 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
UPK1AO00322 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
UPK1AO00322 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.11■□□□□ 0.01
UPK1AO00322 SLC25A39P2-201ENST00000537614 270 ntBASIC15.11■□□□□ 0.01
UPK1AO00322 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.11■□□□□ 0.01
UPK1AO00322 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
UPK1AO00322 AL513210.1-201ENST00000629608 234 ntBASIC15.11■□□□□ 0.01
UPK1AO00322 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK1AO00322 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK1AO00322 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.11■□□□□ 0.01
UPK1AO00322 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK1AO00322 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK1AO00322 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK1AO00322 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK1AO00322 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.11■□□□□ 0.01
UPK1AO00322 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
UPK1AO00322 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1AO00322 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 LINC01101-201ENST00000622953 1884 ntBASIC15.1■□□□□ 0.01
UPK1AO00322 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1AO00322 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms