Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC8.82□□□□□ -1
CHKB-CPT1BH3BT56 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC8.82□□□□□ -1
CHKB-CPT1BH3BT56 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
CHKB-CPT1BH3BT56 SP100-205ENST00000409824 1802 ntTSL 5 BASIC8.82□□□□□ -1
CHKB-CPT1BH3BT56 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC8.82□□□□□ -1
CHKB-CPT1BH3BT56 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC8.82□□□□□ -1
CHKB-CPT1BH3BT56 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
CHKB-CPT1BH3BT56 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC8.82□□□□□ -1
CHKB-CPT1BH3BT56 DCT-201ENST00000377028 5064 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CHKB-CPT1BH3BT56 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
CHKB-CPT1BH3BT56 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC8.82□□□□□ -1
CHKB-CPT1BH3BT56 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 TACC2-212ENST00000453444 9158 ntTSL 5 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 CBFA2T2-205ENST00000375279 7617 ntTSL 5 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 TIAM2-202ENST00000318981 5916 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 AOC4P-203ENST00000566825 2289 ntBASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 AC015818.9-201ENST00000591705 4582 ntBASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 QRICH2-201ENST00000262765 5357 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 AL024508.2-201ENST00000607749 1894 ntBASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CHKB-CPT1BH3BT56 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 GREB1L-209ENST00000580732 8749 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 SPECC1L-201ENST00000314328 6756 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 RGS8-201ENST00000258302 5606 ntTSL 1 (best) BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC8.8□□□□□ -1
CHKB-CPT1BH3BT56 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms