Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 KRT8P37-201ENST00000451609 1420 ntBASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 MIR4453-201ENST00000584019 89 ntBASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 AL691403.2-201ENST00000618460 490 ntBASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 AP001059.3-201ENST00000619053 235 ntBASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC162PA2VCL2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 MIR6080-201ENST00000617359 66 ntBASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 HYMAI-201ENST00000635591 3347 ntBASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CCDC162PA2VCL2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.96■□□□□ 0.14
CCDC162PA2VCL2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC162PA2VCL2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 EEF1DP4-201ENST00000446006 880 ntBASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 MIR4313-201ENST00000580760 101 ntBASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 AC007967.4-201ENST00000614700 386 ntBASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC162PA2VCL2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms