Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 AC136632.2-201ENST00000512891 861 ntBASIC13.9□□□□□ -0.18
SHISA3A0PJX4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SHISA3A0PJX4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.9□□□□□ -0.19
SHISA3A0PJX4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.19
SHISA3A0PJX4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.9□□□□□ -0.19
SHISA3A0PJX4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
SHISA3A0PJX4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 AC002347.1-201ENST00000569543 541 ntBASIC13.89□□□□□ -0.19
SHISA3A0PJX4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 AC079781.5-202ENST00000641784 3743 ntBASIC13.89□□□□□ -0.19
SHISA3A0PJX4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 AC097359.2-201ENST00000604992 2389 ntBASIC13.89□□□□□ -0.19
SHISA3A0PJX4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHISA3A0PJX4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 BNIP3P1-202ENST00000550043 1585 ntBASIC13.88□□□□□ -0.19
SHISA3A0PJX4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms