Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
PCDHA4Q9UN74 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 MIR770-201ENST00000390219 98 ntBASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 AC074044.1-201ENST00000609673 707 ntBASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHA4Q9UN74 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.5
PCDHA4Q9UN74 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHA4Q9UN74 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.14■□□□□ 0.5
PCDHA4Q9UN74 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.14■□□□□ 0.5
PCDHA4Q9UN74 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHA4Q9UN74 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHA4Q9UN74 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
PCDHA4Q9UN74 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 AC022144.1-201ENST00000602255 1580 ntBASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 AC105917.1-201ENST00000506637 2539 ntBASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHA4Q9UN74 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 AC092127.1-201ENST00000567093 3455 ntBASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 MRPS18AP1-201ENST00000414458 589 ntBASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 AL512638.1-201ENST00000457493 794 ntBASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHA4Q9UN74 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 364.1 ms