Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 AC099063.4-201ENST00000641099 1602 ntBASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 HMGA1P7-201ENST00000406908 502 ntBASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 AC023274.1-201ENST00000418278 595 ntBASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 MCCD1P2-201ENST00000423228 335 ntBASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 AL513190.1-201ENST00000621254 727 ntBASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LIN7CQ9NUP9 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 AC011477.6-201ENST00000604980 1927 ntBASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 AC140658.5-201ENST00000438532 169 ntBASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 AC092865.6-201ENST00000642101 219 ntBASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 AC138969.2-201ENST00000532739 9932 ntBASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.31□□□□□ -0.28
LIN7CQ9NUP9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIN7CQ9NUP9 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms