Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 NFIC-211ENST00000641145 8399 ntBASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 DOC2GP-202ENST00000514950 1163 ntBASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 SRD5A3P1-201ENST00000603021 949 ntBASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 AF228730.6-201ENST00000641497 218 ntBASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 AC084121.3-201ENST00000641716 218 ntBASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 AC024909.3-201ENST00000611513 2257 ntBASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 CDC14C-201ENST00000428251 1719 ntBASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 HYMAI-201ENST00000635591 3347 ntBASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VAT1LQ9HCJ6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 LINC02447-202ENST00000501888 2146 ntBASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 PRAL-201ENST00000624952 3286 ntBASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 TARDBPP1-201ENST00000442013 1203 ntBASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 EEF1DP4-201ENST00000446006 880 ntBASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 AL450472.2-201ENST00000603663 1156 ntBASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 LINC01115-203ENST00000606068 577 ntBASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VAT1LQ9HCJ6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 AC069224.1-201ENST00000566372 1715 ntBASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms