Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.15□□□□□ -0.14
COMMD4Q9H0A8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.15□□□□□ -0.14
COMMD4Q9H0A8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.15□□□□□ -0.14
COMMD4Q9H0A8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.15□□□□□ -0.14
COMMD4Q9H0A8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.15□□□□□ -0.14
COMMD4Q9H0A8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.15□□□□□ -0.14
COMMD4Q9H0A8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD4Q9H0A8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD4Q9H0A8 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD4Q9H0A8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD4Q9H0A8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD4Q9H0A8 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD4Q9H0A8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD4Q9H0A8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD4Q9H0A8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.15□□□□□ -0.14
COMMD4Q9H0A8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD4Q9H0A8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COMMD4Q9H0A8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
COMMD4Q9H0A8 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
COMMD4Q9H0A8 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
COMMD4Q9H0A8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
COMMD4Q9H0A8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.15□□□□□ -0.15
COMMD4Q9H0A8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 AC018712.1-201ENST00000455767 687 ntBASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 AC109635.5-201ENST00000533593 962 ntBASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 MIR4321-201ENST00000592276 80 ntBASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 AL121912.1-201ENST00000603683 238 ntBASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 TP73-AS1-207ENST00000624167 988 ntBASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COMMD4Q9H0A8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms