Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 AC090616.6-201ENST00000582640 721 ntBASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 HYMAI.1-201ENST00000620949 238 ntBASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 AC011558.1-201ENST00000623459 338 ntBASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 PCDHA3-202ENST00000532566 4594 ntBASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 IGHV3-41-201ENST00000613121 348 ntBASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 AL161772.1-201ENST00000610494 4412 ntBASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLIRPQ9GZT3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 PPT1-213ENST00000641319 2388 ntBASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms