Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 IGLL3P-201ENST00000412472 434 ntBASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 KRT18P3-201ENST00000451602 1288 ntBASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 AC011477.6-201ENST00000604980 1927 ntBASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AMBRA1Q9C0C7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 AC245100.5-201ENST00000452108 331 ntBASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 POLD2P1-201ENST00000511220 997 ntBASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 RNA5SP416-201ENST00000516838 111 ntBASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 AL009183.1-201ENST00000603760 355 ntBASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 AL365330.1-201ENST00000607459 531 ntBASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 AL691403.2-201ENST00000618460 490 ntBASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.96□□□□□ -0.01
AMBRA1Q9C0C7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
AMBRA1Q9C0C7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
AMBRA1Q9C0C7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
AMBRA1Q9C0C7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.96□□□□□ -0.02
AMBRA1Q9C0C7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
AMBRA1Q9C0C7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
AMBRA1Q9C0C7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
AMBRA1Q9C0C7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 LINC00528-201ENST00000600723 2160 ntBASIC14.95□□□□□ -0.02
AMBRA1Q9C0C7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms