Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 BCAR1-209ENST00000546196 1340 ntBASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 AC106881.1-201ENST00000605849 3329 ntBASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 RNA5SP419-201ENST00000515908 135 ntBASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 IGHV3-22-201ENST00000520721 359 ntBASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 AC104692.2-201ENST00000603054 253 ntBASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 AC004877.2-201ENST00000623941 599 ntBASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 AC007064.4-201ENST00000637740 555 ntBASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HDHD3Q9BSH5 AC099063.4-201ENST00000641099 1602 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms