Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 AC105233.2-201ENST00000523697 349 ntBASIC15.14■□□□□ 0.01
COL21A1Q96P44 AF228730.5-201ENST00000530288 346 ntBASIC15.14■□□□□ 0.01
COL21A1Q96P44 KRT8P23-201ENST00000560090 1207 ntBASIC15.14■□□□□ 0.01
COL21A1Q96P44 AL138918.1-201ENST00000568306 659 ntBASIC15.14■□□□□ 0.01
COL21A1Q96P44 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 AL691403.2-201ENST00000618460 490 ntBASIC15.14■□□□□ 0.01
COL21A1Q96P44 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL21A1Q96P44 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL21A1Q96P44 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL21A1Q96P44 TNRC18P2-201ENST00000417666 2714 ntBASIC15.14■□□□□ 0.01
COL21A1Q96P44 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL21A1Q96P44 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.14■□□□□ 0.01
COL21A1Q96P44 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL21A1Q96P44 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL21A1Q96P44 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL21A1Q96P44 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 AP006288.1-201ENST00000446065 395 ntBASIC15.13■□□□□ 0.01
COL21A1Q96P44 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 SNHG9-202ENST00000564014 471 ntBASIC15.13■□□□□ 0.01
COL21A1Q96P44 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 AC004835.2-201ENST00000603762 682 ntBASIC15.13■□□□□ 0.01
COL21A1Q96P44 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 FAM45BP-202ENST00000592932 1624 ntBASIC15.13■□□□□ 0.01
COL21A1Q96P44 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
COL21A1Q96P44 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL21A1Q96P44 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL21A1Q96P44 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL21A1Q96P44 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL21A1Q96P44 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL21A1Q96P44 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL21A1Q96P44 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL21A1Q96P44 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL21A1Q96P44 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL21A1Q96P44 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL21A1Q96P44 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 AC004461.1-201ENST00000412461 403 ntBASIC15.12■□□□□ 0.01
COL21A1Q96P44 AC005237.2-201ENST00000434368 219 ntBASIC15.12■□□□□ 0.01
COL21A1Q96P44 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL21A1Q96P44 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms