Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP6NLQ92738 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP6NLQ92738 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP6NLQ92738 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.93■□□□□ 0.46
USP6NLQ92738 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP6NLQ92738 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.93■□□□□ 0.46
USP6NLQ92738 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.93■□□□□ 0.46
USP6NLQ92738 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.93■□□□□ 0.46
USP6NLQ92738 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.93■□□□□ 0.46
USP6NLQ92738 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
USP6NLQ92738 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP6NLQ92738 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.93■□□□□ 0.46
USP6NLQ92738 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP6NLQ92738 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP6NLQ92738 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.93■□□□□ 0.46
USP6NLQ92738 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.93■□□□□ 0.46
USP6NLQ92738 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.93■□□□□ 0.46
USP6NLQ92738 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.93■□□□□ 0.46
USP6NLQ92738 AC091271.1-201ENST00000611877 1162 ntBASIC17.93■□□□□ 0.46
USP6NLQ92738 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.93■□□□□ 0.46
USP6NLQ92738 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP6NLQ92738 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP6NLQ92738 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP6NLQ92738 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP6NLQ92738 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
USP6NLQ92738 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP6NLQ92738 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP6NLQ92738 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP6NLQ92738 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP6NLQ92738 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP6NLQ92738 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP6NLQ92738 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP6NLQ92738 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.92■□□□□ 0.46
USP6NLQ92738 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
USP6NLQ92738 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.92■□□□□ 0.46
USP6NLQ92738 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP6NLQ92738 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.92■□□□□ 0.46
USP6NLQ92738 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP6NLQ92738 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP6NLQ92738 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP6NLQ92738 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP6NLQ92738 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.92■□□□□ 0.46
USP6NLQ92738 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP6NLQ92738 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP6NLQ92738 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP6NLQ92738 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP6NLQ92738 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
USP6NLQ92738 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.92■□□□□ 0.46
USP6NLQ92738 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP6NLQ92738 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP6NLQ92738 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.92■□□□□ 0.46
USP6NLQ92738 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.92■□□□□ 0.46
USP6NLQ92738 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.92■□□□□ 0.46
USP6NLQ92738 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.92■□□□□ 0.46
USP6NLQ92738 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.92■□□□□ 0.46
USP6NLQ92738 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
USP6NLQ92738 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP6NLQ92738 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP6NLQ92738 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP6NLQ92738 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.92■□□□□ 0.46
USP6NLQ92738 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.92■□□□□ 0.46
USP6NLQ92738 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.92■□□□□ 0.46
USP6NLQ92738 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP6NLQ92738 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP6NLQ92738 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP6NLQ92738 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.92■□□□□ 0.46
USP6NLQ92738 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
USP6NLQ92738 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP6NLQ92738 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP6NLQ92738 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP6NLQ92738 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP6NLQ92738 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP6NLQ92738 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP6NLQ92738 RNF216P1-203ENST00000404404 2427 ntBASIC17.91■□□□□ 0.46
USP6NLQ92738 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP6NLQ92738 DRD5P1-201ENST00000456605 1438 ntBASIC17.91■□□□□ 0.46
USP6NLQ92738 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP6NLQ92738 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP6NLQ92738 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP6NLQ92738 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
USP6NLQ92738 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP6NLQ92738 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP6NLQ92738 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP6NLQ92738 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP6NLQ92738 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP6NLQ92738 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
USP6NLQ92738 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
USP6NLQ92738 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.91■□□□□ 0.46
USP6NLQ92738 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.91■□□□□ 0.46
USP6NLQ92738 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.91■□□□□ 0.46
USP6NLQ92738 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP6NLQ92738 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.91■□□□□ 0.46
USP6NLQ92738 AC025279.2-201ENST00000569730 653 ntBASIC17.91■□□□□ 0.46
USP6NLQ92738 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.91■□□□□ 0.46
USP6NLQ92738 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
USP6NLQ92738 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP6NLQ92738 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP6NLQ92738 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP6NLQ92738 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.91■□□□□ 0.46
USP6NLQ92738 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms