Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.47■□□□□ 0.07
LMX1AQ8TE12 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LMX1AQ8TE12 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LMX1AQ8TE12 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.47■□□□□ 0.07
LMX1AQ8TE12 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
LMX1AQ8TE12 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LMX1AQ8TE12 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LMX1AQ8TE12 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LMX1AQ8TE12 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.47■□□□□ 0.07
LMX1AQ8TE12 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.47■□□□□ 0.07
LMX1AQ8TE12 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.47■□□□□ 0.07
LMX1AQ8TE12 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LMX1AQ8TE12 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.47■□□□□ 0.07
LMX1AQ8TE12 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LMX1AQ8TE12 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.47■□□□□ 0.07
LMX1AQ8TE12 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 TOMM22P5-201ENST00000416399 439 ntBASIC15.46■□□□□ 0.07
LMX1AQ8TE12 KRT43P-201ENST00000434019 910 ntBASIC15.46■□□□□ 0.07
LMX1AQ8TE12 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 HNRNPUP1-201ENST00000554987 333 ntBASIC15.46■□□□□ 0.07
LMX1AQ8TE12 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 BTNL10-201ENST00000595971 695 ntBASIC15.46■□□□□ 0.07
LMX1AQ8TE12 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
LMX1AQ8TE12 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.06
LMX1AQ8TE12 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
LMX1AQ8TE12 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 AC134915.1-201ENST00000426461 574 ntBASIC15.45■□□□□ 0.06
LMX1AQ8TE12 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
LMX1AQ8TE12 TDH-203ENST00000531764 1110 ntBASIC15.45■□□□□ 0.06
LMX1AQ8TE12 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms