Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 FOXO1B-201ENST00000504678 1527 ntBASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 UXT-AS1-201ENST00000590504 1525 ntBASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 HLA-H-201ENST00000383620 1096 ntBASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 ALG1L5P-201ENST00000482043 771 ntBASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 KRT8P23-201ENST00000560090 1207 ntBASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAF3IP1Q8TDR0 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 DNAJB3-201ENST00000446806 729 ntBASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAF3IP1Q8TDR0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP1Q8TDR0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP1Q8TDR0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP1Q8TDR0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP1Q8TDR0 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP1Q8TDR0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRAF3IP1Q8TDR0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP1Q8TDR0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRAF3IP1Q8TDR0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP1Q8TDR0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAF3IP1Q8TDR0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP1Q8TDR0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP1Q8TDR0 FAM220BP-201ENST00000377689 816 ntBASIC16.66■□□□□ 0.26
TRAF3IP1Q8TDR0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAF3IP1Q8TDR0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms