Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 C1R-201ENST00000535233 2211 ntTSL 2 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 PRORSD1P-201ENST00000295112 541 ntBASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 CDK2AP2P3-201ENST00000422476 372 ntBASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 AL353135.1-201ENST00000606729 504 ntBASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 IGHV3-41-201ENST00000613121 348 ntBASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 KRT18P22-201ENST00000402024 1347 ntBASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 MIR718-201ENST00000390190 70 ntBASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 PMS2P1-201ENST00000431037 1228 ntBASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 AC246785.2-201ENST00000432512 513 ntBASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 GCSHP5-201ENST00000443090 522 ntBASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 AC090616.6-201ENST00000582640 721 ntBASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 AC011558.1-201ENST00000623459 338 ntBASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms