Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 NFIC-211ENST00000641145 8399 ntBASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 AL009178.2-201ENST00000597278 2719 ntBASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 AL136982.4-201ENST00000437689 1740 ntBASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 SNHG9-202ENST00000564014 471 ntBASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 AC026150.2-201ENST00000564693 1156 ntBASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 AL365330.1-201ENST00000607459 531 ntBASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.09■□□□□ 0.01
SIMC1Q8NDZ2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SIMC1Q8NDZ2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
SIMC1Q8NDZ2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
SIMC1Q8NDZ2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
SIMC1Q8NDZ2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SIMC1Q8NDZ2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SIMC1Q8NDZ2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SIMC1Q8NDZ2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
SIMC1Q8NDZ2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
SIMC1Q8NDZ2 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SIMC1Q8NDZ2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SIMC1Q8NDZ2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SIMC1Q8NDZ2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SIMC1Q8NDZ2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 HLA-H-201ENST00000383620 1096 ntBASIC15.08■□□□□ 0
SIMC1Q8NDZ2 MIR648-201ENST00000385046 94 ntBASIC15.08■□□□□ 0
SIMC1Q8NDZ2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 AC109322.1-201ENST00000524499 1264 ntBASIC15.08■□□□□ 0
SIMC1Q8NDZ2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 AC006058.4-201ENST00000624016 1670 ntBASIC15.08■□□□□ 0
SIMC1Q8NDZ2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.08■□□□□ 0
SIMC1Q8NDZ2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms