Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 PAWRP1-201ENST00000451083 565 ntBASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 AC087163.2-201ENST00000457299 853 ntBASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 YBX1P5-201ENST00000509441 847 ntBASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 WBP1LP6-201ENST00000438434 424 ntBASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 ZNF506-204ENST00000545006 1007 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 GGTLC5P-201ENST00000617623 998 ntBASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 C20orf181-201ENST00000623918 480 ntBASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 AL671710.1-201ENST00000610245 2349 ntBASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
EFCAB3Q8N7B9 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.08■□□□□ 0.17
EFCAB3Q8N7B9 LINC00895-201ENST00000629028 1637 ntBASIC16.08■□□□□ 0.17
EFCAB3Q8N7B9 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
EFCAB3Q8N7B9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.08■□□□□ 0.17
EFCAB3Q8N7B9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
EFCAB3Q8N7B9 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
EFCAB3Q8N7B9 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
EFCAB3Q8N7B9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
EFCAB3Q8N7B9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
EFCAB3Q8N7B9 AP005117.1-202ENST00000581724 1908 ntBASIC16.08■□□□□ 0.16
EFCAB3Q8N7B9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EFCAB3Q8N7B9 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
EFCAB3Q8N7B9 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
EFCAB3Q8N7B9 SFR1P2-201ENST00000421841 730 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms