Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC005593.1-201ENST00000624894 515 ntBASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 LINC01101-201ENST00000622953 1884 ntBASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 FAM210CP-201ENST00000445714 574 ntBASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 KRT18P34-201ENST00000488218 1270 ntBASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 AC073648.2-201ENST00000510116 352 ntBASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 AC105339.3-201ENST00000560043 636 ntBASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 MIR4321-201ENST00000592276 80 ntBASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 CLEC4GP1-201ENST00000596555 870 ntBASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 SBF1P1-201ENST00000444527 5631 ntBASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUDCD3Q8IVD9 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
NUDCD3Q8IVD9 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms