Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
LRRTM1Q86UE6 AC126365.1-201ENST00000578585 1514 ntBASIC13.9□□□□□ -0.19
LRRTM1Q86UE6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
LRRTM1Q86UE6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
LRRTM1Q86UE6 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 AC013726.1-201ENST00000563747 2285 ntBASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 HNRNPDP1-201ENST00000439535 754 ntBASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 PRSS29P-201ENST00000440800 595 ntBASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 AL009183.1-201ENST00000603760 355 ntBASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 AC026748.1-201ENST00000624349 3251 ntBASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRRTM1Q86UE6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 AC092474.2-201ENST00000424288 719 ntBASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 KRT18P35-201ENST00000510488 1269 ntBASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.88□□□□□ -0.19
LRRTM1Q86UE6 MIR4313-201ENST00000580760 101 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms