Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.59□□□□□ -0.23
LRRK2Q5S007 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC13.59□□□□□ -0.23
LRRK2Q5S007 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LRRK2Q5S007 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.59□□□□□ -0.23
LRRK2Q5S007 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC13.59□□□□□ -0.23
LRRK2Q5S007 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.59□□□□□ -0.23
LRRK2Q5S007 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LRRK2Q5S007 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRRK2Q5S007 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
LRRK2Q5S007 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRRK2Q5S007 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRRK2Q5S007 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRRK2Q5S007 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRRK2Q5S007 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRRK2Q5S007 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRRK2Q5S007 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRRK2Q5S007 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.58□□□□□ -0.23
LRRK2Q5S007 BNIP3P13-201ENST00000599968 566 ntBASIC13.58□□□□□ -0.23
LRRK2Q5S007 AC068587.8-201ENST00000641239 219 ntBASIC13.58□□□□□ -0.23
LRRK2Q5S007 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRK2Q5S007 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRK2Q5S007 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.58□□□□□ -0.24
LRRK2Q5S007 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LRRK2Q5S007 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.58□□□□□ -0.24
LRRK2Q5S007 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.58□□□□□ -0.24
LRRK2Q5S007 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRK2Q5S007 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRK2Q5S007 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.58□□□□□ -0.24
LRRK2Q5S007 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LRRK2Q5S007 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LRRK2Q5S007 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRK2Q5S007 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LRRK2Q5S007 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LRRK2Q5S007 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
LRRK2Q5S007 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.58□□□□□ -0.24
LRRK2Q5S007 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRK2Q5S007 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LRRK2Q5S007 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC13.58□□□□□ -0.24
LRRK2Q5S007 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC13.58□□□□□ -0.24
LRRK2Q5S007 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
LRRK2Q5S007 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.58□□□□□ -0.24
LRRK2Q5S007 AP005019.2-201ENST00000615104 511 ntBASIC13.58□□□□□ -0.24
LRRK2Q5S007 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRK2Q5S007 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRK2Q5S007 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LRRK2Q5S007 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LRRK2Q5S007 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 AL138799.1-201ENST00000448213 1675 ntBASIC13.57□□□□□ -0.24
LRRK2Q5S007 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRK2Q5S007 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.57□□□□□ -0.24
LRRK2Q5S007 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms