Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 METTL21AP1-201ENST00000438852 635 ntBASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 AC093028.1-201ENST00000622998 982 ntBASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KHDC1Q4VXA5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 RBPMS2P1-201ENST00000437762 623 ntBASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 SPDYE14P-201ENST00000442619 822 ntBASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 HLA-J-203ENST00000494367 1087 ntBASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 SPTSSB-204ENST00000617024 1292 ntBASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 AL589702.1-201ENST00000641229 1509 ntBASIC16.19■□□□□ 0.18
KHDC1Q4VXA5 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
KHDC1Q4VXA5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
KHDC1Q4VXA5 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
KHDC1Q4VXA5 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.18■□□□□ 0.18
KHDC1Q4VXA5 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KHDC1Q4VXA5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
KHDC1Q4VXA5 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KHDC1Q4VXA5 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
KHDC1Q4VXA5 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KHDC1Q4VXA5 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KHDC1Q4VXA5 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KHDC1Q4VXA5 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
KHDC1Q4VXA5 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KHDC1Q4VXA5 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
KHDC1Q4VXA5 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KHDC1Q4VXA5 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
KHDC1Q4VXA5 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KHDC1Q4VXA5 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.18■□□□□ 0.18
KHDC1Q4VXA5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms