Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.28■□□□□ 0.52
CHMP4BP1P59074 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 AL645728.1-201ENST00000366221 2101 ntBASIC18.28■□□□□ 0.52
CHMP4BP1P59074 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 HLA-A-202ENST00000376806 1854 ntBASIC18.27■□□□□ 0.52
CHMP4BP1P59074 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 NME2P1-201ENST00000426182 414 ntBASIC18.27■□□□□ 0.52
CHMP4BP1P59074 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 AC009477.1-201ENST00000452936 217 ntBASIC18.27■□□□□ 0.52
CHMP4BP1P59074 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 BANF1P1-201ENST00000553684 263 ntBASIC18.27■□□□□ 0.52
CHMP4BP1P59074 AL079307.3-201ENST00000556114 283 ntBASIC18.27■□□□□ 0.52
CHMP4BP1P59074 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 AL844908.2-201ENST00000609461 460 ntBASIC18.27■□□□□ 0.52
CHMP4BP1P59074 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.27■□□□□ 0.52
CHMP4BP1P59074 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.27■□□□□ 0.52
CHMP4BP1P59074 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.27■□□□□ 0.52
CHMP4BP1P59074 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.27■□□□□ 0.52
CHMP4BP1P59074 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 AC004840.1-201ENST00000636359 365 ntBASIC18.27■□□□□ 0.52
CHMP4BP1P59074 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP4BP1P59074 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP4BP1P59074 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CHMP4BP1P59074 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.27■□□□□ 0.51
CHMP4BP1P59074 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.27■□□□□ 0.51
CHMP4BP1P59074 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP4BP1P59074 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CHMP4BP1P59074 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 AC104794.3-201ENST00000566840 1248 ntBASIC18.26■□□□□ 0.51
CHMP4BP1P59074 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP4BP1P59074 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms