Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN6P56747 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN6P56747 C2orf69P2-201ENST00000562032 1123 ntBASIC15.26■□□□□ 0.03
CLDN6P56747 AC124283.3-201ENST00000570869 594 ntBASIC15.26■□□□□ 0.03
CLDN6P56747 CLUHP6-201ENST00000580789 941 ntBASIC15.26■□□□□ 0.03
CLDN6P56747 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN6P56747 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN6P56747 AC010328.2-201ENST00000597698 1111 ntBASIC15.26■□□□□ 0.03
CLDN6P56747 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN6P56747 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN6P56747 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN6P56747 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN6P56747 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLDN6P56747 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN6P56747 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN6P56747 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN6P56747 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN6P56747 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN6P56747 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CLDN6P56747 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN6P56747 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLDN6P56747 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLDN6P56747 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN6P56747 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN6P56747 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN6P56747 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLDN6P56747 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN6P56747 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CLDN6P56747 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 MIR1247-201ENST00000408206 136 ntBASIC15.25■□□□□ 0.03
CLDN6P56747 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN6P56747 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
CLDN6P56747 VDAC1P7-201ENST00000462417 847 ntBASIC15.25■□□□□ 0.03
CLDN6P56747 AP002490.2-201ENST00000524791 560 ntBASIC15.25■□□□□ 0.03
CLDN6P56747 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.25■□□□□ 0.03
CLDN6P56747 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN6P56747 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN6P56747 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN6P56747 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN6P56747 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN6P56747 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN6P56747 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN6P56747 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN6P56747 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CLDN6P56747 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 AL139099.5-201ENST00000635274 300 ntBASIC15.25■□□□□ 0.03
CLDN6P56747 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN6P56747 INTS4P2-202ENST00000614726 2019 ntBASIC15.25■□□□□ 0.03
CLDN6P56747 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
CLDN6P56747 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLDN6P56747 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN6P56747 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
CLDN6P56747 AL691432.1-201ENST00000596308 1422 ntBASIC15.25■□□□□ 0.03
CLDN6P56747 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN6P56747 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN6P56747 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CLDN6P56747 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.24■□□□□ 0.03
CLDN6P56747 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
CLDN6P56747 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.24■□□□□ 0.03
CLDN6P56747 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CLDN6P56747 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CLDN6P56747 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.24■□□□□ 0.03
CLDN6P56747 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CLDN6P56747 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN6P56747 AC134915.1-201ENST00000426461 574 ntBASIC15.24■□□□□ 0.03
CLDN6P56747 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.24■□□□□ 0.03
CLDN6P56747 AL355864.2-201ENST00000447420 863 ntBASIC15.24■□□□□ 0.03
CLDN6P56747 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN6P56747 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN6P56747 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms