Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC11.87□□□□□ -0.51
CMC4P56277 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.87□□□□□ -0.51
CMC4P56277 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC11.87□□□□□ -0.51
CMC4P56277 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CMC4P56277 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
CMC4P56277 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC11.87□□□□□ -0.51
CMC4P56277 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CMC4P56277 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.87□□□□□ -0.51
CMC4P56277 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.87□□□□□ -0.51
CMC4P56277 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.87□□□□□ -0.51
CMC4P56277 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 AL080243.2-201ENST00000418783 582 ntBASIC11.87□□□□□ -0.51
CMC4P56277 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.87□□□□□ -0.51
CMC4P56277 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.87□□□□□ -0.51
CMC4P56277 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
CMC4P56277 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC11.87□□□□□ -0.51
CMC4P56277 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.87□□□□□ -0.51
CMC4P56277 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.87□□□□□ -0.51
CMC4P56277 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.87□□□□□ -0.51
CMC4P56277 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.87□□□□□ -0.51
CMC4P56277 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.87□□□□□ -0.51
CMC4P56277 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC11.87□□□□□ -0.51
CMC4P56277 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
CMC4P56277 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CMC4P56277 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.87□□□□□ -0.51
CMC4P56277 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC11.87□□□□□ -0.51
CMC4P56277 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CMC4P56277 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CMC4P56277 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.87□□□□□ -0.51
CMC4P56277 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC11.87□□□□□ -0.51
CMC4P56277 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.87□□□□□ -0.51
CMC4P56277 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC11.87□□□□□ -0.51
CMC4P56277 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
CMC4P56277 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC11.87□□□□□ -0.51
CMC4P56277 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CMC4P56277 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CMC4P56277 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.86□□□□□ -0.51
CMC4P56277 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.86□□□□□ -0.51
CMC4P56277 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.86□□□□□ -0.51
CMC4P56277 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC11.86□□□□□ -0.51
CMC4P56277 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC11.86□□□□□ -0.51
CMC4P56277 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.86□□□□□ -0.51
CMC4P56277 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC11.86□□□□□ -0.51
CMC4P56277 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.86□□□□□ -0.51
CMC4P56277 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC11.86□□□□□ -0.51
CMC4P56277 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CMC4P56277 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
CMC4P56277 MEP1AP4-201ENST00000423244 1087 ntBASIC11.86□□□□□ -0.51
CMC4P56277 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.86□□□□□ -0.51
CMC4P56277 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC11.86□□□□□ -0.51
CMC4P56277 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.86□□□□□ -0.51
CMC4P56277 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC11.86□□□□□ -0.51
CMC4P56277 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.86□□□□□ -0.51
CMC4P56277 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.86□□□□□ -0.51
CMC4P56277 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC11.86□□□□□ -0.51
CMC4P56277 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.86□□□□□ -0.51
CMC4P56277 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.86□□□□□ -0.51
CMC4P56277 AC074044.1-201ENST00000609673 707 ntBASIC11.86□□□□□ -0.51
CMC4P56277 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC11.86□□□□□ -0.51
CMC4P56277 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CMC4P56277 AL390754.1-201ENST00000619088 582 ntBASIC11.86□□□□□ -0.51
CMC4P56277 AJ011932.1-201ENST00000621707 465 ntBASIC11.86□□□□□ -0.51
CMC4P56277 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC11.86□□□□□ -0.51
CMC4P56277 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms