Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.11□□□□□ -0.15
SOX2P48431 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SOX2P48431 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
SOX2P48431 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
SOX2P48431 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
SOX2P48431 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.11□□□□□ -0.15
SOX2P48431 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 HNRNPDP1-201ENST00000439535 754 ntBASIC14.11□□□□□ -0.15
SOX2P48431 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SOX2P48431 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.11□□□□□ -0.15
SOX2P48431 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.11□□□□□ -0.15
SOX2P48431 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.11□□□□□ -0.15
SOX2P48431 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.11□□□□□ -0.15
SOX2P48431 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SOX2P48431 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.11□□□□□ -0.15
SOX2P48431 IFNL4P1-201ENST00000607083 540 ntBASIC14.11□□□□□ -0.15
SOX2P48431 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
SOX2P48431 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SOX2P48431 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SOX2P48431 AC012313.10-201ENST00000623509 926 ntBASIC14.11□□□□□ -0.15
SOX2P48431 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.11□□□□□ -0.15
SOX2P48431 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.11□□□□□ -0.15
SOX2P48431 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 ST20-AS1-201ENST00000560255 4223 ntBASIC14.11□□□□□ -0.15
SOX2P48431 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.11□□□□□ -0.15
SOX2P48431 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.11□□□□□ -0.15
SOX2P48431 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SOX2P48431 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.11□□□□□ -0.15
SOX2P48431 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
SOX2P48431 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.11□□□□□ -0.15
SOX2P48431 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.11□□□□□ -0.15
SOX2P48431 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SOX2P48431 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.1□□□□□ -0.15
SOX2P48431 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SOX2P48431 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.1□□□□□ -0.15
SOX2P48431 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SOX2P48431 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SOX2P48431 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.1□□□□□ -0.15
SOX2P48431 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.1□□□□□ -0.15
SOX2P48431 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.1□□□□□ -0.15
SOX2P48431 MIR3909-201ENST00000579518 119 ntBASIC14.1□□□□□ -0.15
SOX2P48431 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SOX2P48431 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 AL645728.2-201ENST00000641974 660 ntBASIC14.1□□□□□ -0.15
SOX2P48431 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SOX2P48431 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
SOX2P48431 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SOX2P48431 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
SOX2P48431 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.1□□□□□ -0.15
SOX2P48431 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SOX2P48431 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SOX2P48431 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SOX2P48431 AC011477.6-201ENST00000604980 1927 ntBASIC14.09□□□□□ -0.15
SOX2P48431 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SOX2P48431 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms