Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFX1P22670 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX1P22670 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.38■□□□□ 0.37
RFX1P22670 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX1P22670 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RFX1P22670 AC025048.6-201ENST00000634326 1161 ntBASIC17.38■□□□□ 0.37
RFX1P22670 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX1P22670 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.38■□□□□ 0.37
RFX1P22670 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX1P22670 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX1P22670 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RFX1P22670 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFX1P22670 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.38■□□□□ 0.37
RFX1P22670 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX1P22670 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
RFX1P22670 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RFX1P22670 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX1P22670 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFX1P22670 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX1P22670 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.37■□□□□ 0.37
RFX1P22670 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RFX1P22670 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX1P22670 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX1P22670 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX1P22670 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX1P22670 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.37■□□□□ 0.37
RFX1P22670 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX1P22670 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX1P22670 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.37■□□□□ 0.37
RFX1P22670 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.37■□□□□ 0.37
RFX1P22670 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.37■□□□□ 0.37
RFX1P22670 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
RFX1P22670 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.37■□□□□ 0.37
RFX1P22670 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.37■□□□□ 0.37
RFX1P22670 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX1P22670 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RFX1P22670 SERBP1P5-201ENST00000510079 1181 ntBASIC17.37■□□□□ 0.37
RFX1P22670 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.37■□□□□ 0.37
RFX1P22670 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFX1P22670 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.37■□□□□ 0.37
RFX1P22670 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.37■□□□□ 0.37
RFX1P22670 AL662799.1-202ENST00000614205 422 ntBASIC17.37■□□□□ 0.37
RFX1P22670 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.37■□□□□ 0.37
RFX1P22670 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFX1P22670 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.37■□□□□ 0.37
RFX1P22670 PAUPAR-201ENST00000630360 2965 ntBASIC17.37■□□□□ 0.37
RFX1P22670 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.37■□□□□ 0.37
RFX1P22670 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX1P22670 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.37■□□□□ 0.37
RFX1P22670 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX1P22670 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RFX1P22670 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX1P22670 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.36■□□□□ 0.37
RFX1P22670 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX1P22670 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RFX1P22670 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX1P22670 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX1P22670 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX1P22670 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.36■□□□□ 0.37
RFX1P22670 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX1P22670 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX1P22670 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.36■□□□□ 0.37
RFX1P22670 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.36■□□□□ 0.37
RFX1P22670 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.36■□□□□ 0.37
RFX1P22670 ATP5G2P4-201ENST00000442175 420 ntBASIC17.36■□□□□ 0.37
RFX1P22670 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.36■□□□□ 0.37
RFX1P22670 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.36■□□□□ 0.37
RFX1P22670 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.36■□□□□ 0.37
RFX1P22670 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.36■□□□□ 0.37
RFX1P22670 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RFX1P22670 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX1P22670 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX1P22670 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX1P22670 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.36■□□□□ 0.37
RFX1P22670 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RFX1P22670 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.36■□□□□ 0.37
RFX1P22670 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
RFX1P22670 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX1P22670 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
RFX1P22670 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX1P22670 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX1P22670 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
RFX1P22670 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX1P22670 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX1P22670 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX1P22670 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.35■□□□□ 0.37
RFX1P22670 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.35■□□□□ 0.37
RFX1P22670 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.35■□□□□ 0.37
RFX1P22670 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX1P22670 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RFX1P22670 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.35■□□□□ 0.37
RFX1P22670 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX1P22670 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX1P22670 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX1P22670 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RFX1P22670 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
RFX1P22670 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX1P22670 MIR346-201ENST00000362234 95 ntBASIC17.35■□□□□ 0.37
RFX1P22670 HLA-H-201ENST00000383620 1096 ntBASIC17.35■□□□□ 0.37
RFX1P22670 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms