Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
CAPN3P20807 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN3P20807 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN3P20807 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.42■□□□□ 0.06
CAPN3P20807 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN3P20807 HLA-J-203ENST00000494367 1087 ntBASIC15.42■□□□□ 0.06
CAPN3P20807 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN3P20807 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.42■□□□□ 0.06
CAPN3P20807 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.42■□□□□ 0.06
CAPN3P20807 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.42■□□□□ 0.06
CAPN3P20807 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.42■□□□□ 0.06
CAPN3P20807 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN3P20807 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN3P20807 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.42■□□□□ 0.06
CAPN3P20807 AC009090.5-201ENST00000624886 2285 ntBASIC15.42■□□□□ 0.06
CAPN3P20807 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CAPN3P20807 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN3P20807 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN3P20807 AC134407.2-201ENST00000625089 1978 ntBASIC15.42■□□□□ 0.06
CAPN3P20807 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
CAPN3P20807 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPN3P20807 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPN3P20807 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPN3P20807 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.41■□□□□ 0.06
CAPN3P20807 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPN3P20807 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CAPN3P20807 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPN3P20807 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPN3P20807 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPN3P20807 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CAPN3P20807 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CAPN3P20807 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.41■□□□□ 0.06
CAPN3P20807 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.41■□□□□ 0.06
CAPN3P20807 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPN3P20807 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CAPN3P20807 MKNK2P1-201ENST00000437526 628 ntBASIC15.41■□□□□ 0.06
CAPN3P20807 AL513480.1-201ENST00000451731 511 ntBASIC15.41■□□□□ 0.06
CAPN3P20807 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CAPN3P20807 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPN3P20807 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.41■□□□□ 0.06
CAPN3P20807 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPN3P20807 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.41■□□□□ 0.06
CAPN3P20807 MIR4469-201ENST00000583919 79 ntBASIC15.41■□□□□ 0.06
CAPN3P20807 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CAPN3P20807 AL365330.1-201ENST00000607459 531 ntBASIC15.41■□□□□ 0.06
CAPN3P20807 C20orf181-201ENST00000623918 480 ntBASIC15.41■□□□□ 0.06
CAPN3P20807 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPN3P20807 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CAPN3P20807 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CAPN3P20807 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.41■□□□□ 0.06
CAPN3P20807 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPN3P20807 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPN3P20807 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.41■□□□□ 0.06
CAPN3P20807 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPN3P20807 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN3P20807 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CAPN3P20807 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CAPN3P20807 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CAPN3P20807 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.4■□□□□ 0.06
CAPN3P20807 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN3P20807 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CAPN3P20807 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CAPN3P20807 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.4■□□□□ 0.06
CAPN3P20807 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms