Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
RAB4AP20338 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 KRT8P10-201ENST00000450021 1447 ntBASIC12.31□□□□□ -0.44
RAB4AP20338 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB4AP20338 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RAB4AP20338 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
RAB4AP20338 MDFI-202ENST00000373050 809 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB4AP20338 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
RAB4AP20338 ECEL1P3-201ENST00000427961 737 ntBASIC12.31□□□□□ -0.44
RAB4AP20338 HLA-F-220ENST00000434407 884 ntBASIC12.31□□□□□ -0.44
RAB4AP20338 AC122714.2-201ENST00000502787 707 ntBASIC12.31□□□□□ -0.44
RAB4AP20338 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB4AP20338 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.31□□□□□ -0.44
RAB4AP20338 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RAB4AP20338 FAM87A-204ENST00000613235 858 ntBASIC12.31□□□□□ -0.44
RAB4AP20338 ITM2C-210ENST00000620962 501 ntBASIC12.31□□□□□ -0.44
RAB4AP20338 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.31□□□□□ -0.44
RAB4AP20338 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.31□□□□□ -0.44
RAB4AP20338 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
RAB4AP20338 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RAB4AP20338 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.31□□□□□ -0.44
RAB4AP20338 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.31□□□□□ -0.44
RAB4AP20338 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RAB4AP20338 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RAB4AP20338 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RAB4AP20338 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
RAB4AP20338 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
RAB4AP20338 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB4AP20338 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB4AP20338 LINC00895-201ENST00000629028 1637 ntBASIC12.3□□□□□ -0.44
RAB4AP20338 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB4AP20338 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
RAB4AP20338 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.3□□□□□ -0.44
RAB4AP20338 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
RAB4AP20338 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RAB4AP20338 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 MIR935-201ENST00000401179 91 ntBASIC12.3□□□□□ -0.44
RAB4AP20338 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC12.3□□□□□ -0.44
RAB4AP20338 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
RAB4AP20338 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.3□□□□□ -0.44
RAB4AP20338 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.3□□□□□ -0.44
RAB4AP20338 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC12.3□□□□□ -0.44
RAB4AP20338 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.3□□□□□ -0.44
RAB4AP20338 MIR4785-201ENST00000585005 73 ntBASIC12.3□□□□□ -0.44
RAB4AP20338 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.3□□□□□ -0.44
RAB4AP20338 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
RAB4AP20338 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB4AP20338 AC092666.2-201ENST00000613287 246 ntBASIC12.3□□□□□ -0.44
RAB4AP20338 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.3□□□□□ -0.44
RAB4AP20338 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.3□□□□□ -0.44
RAB4AP20338 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB4AP20338 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB4AP20338 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
RAB4AP20338 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.3□□□□□ -0.44
RAB4AP20338 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.3□□□□□ -0.44
RAB4AP20338 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB4AP20338 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
RAB4AP20338 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms