Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCG2P13521 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCG2P13521 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.3■□□□□ 0.52
SCG2P13521 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCG2P13521 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.3■□□□□ 0.52
SCG2P13521 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCG2P13521 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.3■□□□□ 0.52
SCG2P13521 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCG2P13521 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCG2P13521 AC074338.1-201ENST00000416825 156 ntBASIC18.3■□□□□ 0.52
SCG2P13521 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.3■□□□□ 0.52
SCG2P13521 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.3■□□□□ 0.52
SCG2P13521 SDHAP3-202ENST00000515467 728 ntBASIC18.3■□□□□ 0.52
SCG2P13521 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.3■□□□□ 0.52
SCG2P13521 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.3■□□□□ 0.52
SCG2P13521 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.3■□□□□ 0.52
SCG2P13521 AC009407.1-201ENST00000568958 598 ntBASIC18.3■□□□□ 0.52
SCG2P13521 AL109936.8-201ENST00000641772 604 ntBASIC18.3■□□□□ 0.52
SCG2P13521 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.3■□□□□ 0.52
SCG2P13521 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCG2P13521 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCG2P13521 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SCG2P13521 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SCG2P13521 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCG2P13521 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
SCG2P13521 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.3■□□□□ 0.52
SCG2P13521 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCG2P13521 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCG2P13521 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCG2P13521 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
SCG2P13521 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
SCG2P13521 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCG2P13521 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCG2P13521 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCG2P13521 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.29■□□□□ 0.52
SCG2P13521 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
SCG2P13521 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SCG2P13521 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCG2P13521 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.29■□□□□ 0.52
SCG2P13521 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.29■□□□□ 0.52
SCG2P13521 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.29■□□□□ 0.52
SCG2P13521 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.29■□□□□ 0.52
SCG2P13521 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.29■□□□□ 0.52
SCG2P13521 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCG2P13521 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCG2P13521 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCG2P13521 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCG2P13521 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCG2P13521 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCG2P13521 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCG2P13521 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCG2P13521 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SCG2P13521 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.29■□□□□ 0.52
SCG2P13521 AC022144.1-201ENST00000602255 1580 ntBASIC18.29■□□□□ 0.52
SCG2P13521 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.29■□□□□ 0.52
SCG2P13521 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SCG2P13521 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCG2P13521 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SCG2P13521 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCG2P13521 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCG2P13521 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCG2P13521 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.28■□□□□ 0.52
SCG2P13521 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCG2P13521 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SCG2P13521 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.28■□□□□ 0.52
SCG2P13521 CICP13-201ENST00000422015 2789 ntBASIC18.28■□□□□ 0.52
SCG2P13521 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.28■□□□□ 0.52
SCG2P13521 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.28■□□□□ 0.52
SCG2P13521 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCG2P13521 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SCG2P13521 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCG2P13521 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SCG2P13521 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SCG2P13521 MRPS18AP1-201ENST00000414458 589 ntBASIC18.28■□□□□ 0.52
SCG2P13521 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.28■□□□□ 0.52
SCG2P13521 AL512638.1-201ENST00000457493 794 ntBASIC18.28■□□□□ 0.52
SCG2P13521 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.28■□□□□ 0.52
SCG2P13521 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.28■□□□□ 0.52
SCG2P13521 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.28■□□□□ 0.52
SCG2P13521 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.28■□□□□ 0.52
SCG2P13521 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.28■□□□□ 0.52
SCG2P13521 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.28■□□□□ 0.52
SCG2P13521 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.28■□□□□ 0.52
SCG2P13521 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCG2P13521 AC132872.4-202ENST00000622924 2756 ntBASIC18.28■□□□□ 0.52
SCG2P13521 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SCG2P13521 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCG2P13521 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCG2P13521 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCG2P13521 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SCG2P13521 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCG2P13521 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.27■□□□□ 0.52
SCG2P13521 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.27■□□□□ 0.52
SCG2P13521 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCG2P13521 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCG2P13521 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.27■□□□□ 0.52
SCG2P13521 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCG2P13521 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCG2P13521 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCG2P13521 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms