Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MT-ND1P03886 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MT-ND1P03886 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MT-ND1P03886 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MT-ND1P03886 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.12■□□□□ 0.01
MT-ND1P03886 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
MT-ND1P03886 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.12■□□□□ 0.01
MT-ND1P03886 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MT-ND1P03886 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MT-ND1P03886 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
MT-ND1P03886 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.12■□□□□ 0.01
MT-ND1P03886 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.12■□□□□ 0.01
MT-ND1P03886 FAM197Y8-203ENST00000450145 560 ntBASIC15.12■□□□□ 0.01
MT-ND1P03886 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
MT-ND1P03886 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.12■□□□□ 0.01
MT-ND1P03886 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.12■□□□□ 0.01
MT-ND1P03886 AC105339.3-201ENST00000560043 636 ntBASIC15.12■□□□□ 0.01
MT-ND1P03886 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.12■□□□□ 0.01
MT-ND1P03886 AL356488.2-201ENST00000602755 427 ntBASIC15.12■□□□□ 0.01
MT-ND1P03886 AL121912.1-201ENST00000603683 238 ntBASIC15.12■□□□□ 0.01
MT-ND1P03886 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
MT-ND1P03886 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MT-ND1P03886 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
MT-ND1P03886 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.12■□□□□ 0.01
MT-ND1P03886 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.12■□□□□ 0.01
MT-ND1P03886 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MT-ND1P03886 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MT-ND1P03886 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.12■□□□□ 0.01
MT-ND1P03886 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MT-ND1P03886 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.12■□□□□ 0.01
MT-ND1P03886 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MT-ND1P03886 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
MT-ND1P03886 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MT-ND1P03886 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.12■□□□□ 0.01
MT-ND1P03886 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MT-ND1P03886 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MT-ND1P03886 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
MT-ND1P03886 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MT-ND1P03886 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
MT-ND1P03886 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MT-ND1P03886 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
MT-ND1P03886 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MT-ND1P03886 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MT-ND1P03886 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MT-ND1P03886 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.11■□□□□ 0.01
MT-ND1P03886 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.11■□□□□ 0.01
MT-ND1P03886 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MT-ND1P03886 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
MT-ND1P03886 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MT-ND1P03886 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MT-ND1P03886 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.11■□□□□ 0.01
MT-ND1P03886 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MT-ND1P03886 CICP4-201ENST00000447359 2812 ntBASIC15.11■□□□□ 0.01
MT-ND1P03886 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
MT-ND1P03886 RPS2P28-201ENST00000314255 741 ntBASIC15.11■□□□□ 0.01
MT-ND1P03886 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MT-ND1P03886 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.11■□□□□ 0.01
MT-ND1P03886 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.11■□□□□ 0.01
MT-ND1P03886 AC018712.1-201ENST00000455767 687 ntBASIC15.11■□□□□ 0.01
MT-ND1P03886 EMBP1-201ENST00000458200 901 ntBASIC15.11■□□□□ 0.01
MT-ND1P03886 AF186996.4-201ENST00000467186 377 ntBASIC15.11■□□□□ 0.01
MT-ND1P03886 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.11■□□□□ 0.01
MT-ND1P03886 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MT-ND1P03886 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.11■□□□□ 0.01
MT-ND1P03886 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.11■□□□□ 0.01
MT-ND1P03886 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.11■□□□□ 0.01
MT-ND1P03886 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MT-ND1P03886 TP73-AS1-207ENST00000624167 988 ntBASIC15.11■□□□□ 0.01
MT-ND1P03886 AC005593.1-201ENST00000624894 515 ntBASIC15.11■□□□□ 0.01
MT-ND1P03886 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
MT-ND1P03886 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MT-ND1P03886 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.11■□□□□ 0.01
MT-ND1P03886 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MT-ND1P03886 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MT-ND1P03886 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MT-ND1P03886 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
MT-ND1P03886 AC012569.1-201ENST00000591191 1524 ntBASIC15.11■□□□□ 0.01
MT-ND1P03886 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.11■□□□□ 0.01
MT-ND1P03886 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MT-ND1P03886 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MT-ND1P03886 LINC00552-201ENST00000625151 2579 ntBASIC15.11■□□□□ 0.01
MT-ND1P03886 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.11■□□□□ 0.01
MT-ND1P03886 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
MT-ND1P03886 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MT-ND1P03886 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
MT-ND1P03886 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MT-ND1P03886 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-ND1P03886 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
MT-ND1P03886 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MT-ND1P03886 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
MT-ND1P03886 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-ND1P03886 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-ND1P03886 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MT-ND1P03886 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.1■□□□□ 0.01
MT-ND1P03886 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.1■□□□□ 0.01
MT-ND1P03886 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
MT-ND1P03886 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
MT-ND1P03886 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-ND1P03886 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-ND1P03886 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms