Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.23□□□□□ -0.13
CNOT4O95628 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CNOT4O95628 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.23□□□□□ -0.13
CNOT4O95628 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.23□□□□□ -0.13
CNOT4O95628 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CNOT4O95628 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 KRT8P12-202ENST00000472924 1397 ntBASIC14.23□□□□□ -0.13
CNOT4O95628 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CNOT4O95628 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.23□□□□□ -0.13
CNOT4O95628 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.23□□□□□ -0.13
CNOT4O95628 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 AC004987.2-201ENST00000395959 1148 ntBASIC14.23□□□□□ -0.13
CNOT4O95628 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.23□□□□□ -0.13
CNOT4O95628 MTND6P24-201ENST00000440466 518 ntBASIC14.23□□□□□ -0.13
CNOT4O95628 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.23□□□□□ -0.13
CNOT4O95628 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.23□□□□□ -0.13
CNOT4O95628 ZNF890P-202ENST00000530367 1156 ntBASIC14.23□□□□□ -0.13
CNOT4O95628 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 AC243562.2-201ENST00000561247 970 ntBASIC14.23□□□□□ -0.13
CNOT4O95628 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.23□□□□□ -0.13
CNOT4O95628 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.23□□□□□ -0.13
CNOT4O95628 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.23□□□□□ -0.13
CNOT4O95628 AL138828.2-201ENST00000615812 383 ntBASIC14.23□□□□□ -0.13
CNOT4O95628 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CNOT4O95628 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.23□□□□□ -0.13
CNOT4O95628 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.23□□□□□ -0.13
CNOT4O95628 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.23□□□□□ -0.13
CNOT4O95628 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CNOT4O95628 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.23□□□□□ -0.13
CNOT4O95628 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CNOT4O95628 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CNOT4O95628 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.22□□□□□ -0.13
CNOT4O95628 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 AC087499.5-201ENST00000452760 1342 ntBASIC14.22□□□□□ -0.13
CNOT4O95628 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CNOT4O95628 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CNOT4O95628 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.22□□□□□ -0.13
CNOT4O95628 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.22□□□□□ -0.13
CNOT4O95628 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CNOT4O95628 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
CNOT4O95628 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CNOT4O95628 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CNOT4O95628 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.22□□□□□ -0.13
CNOT4O95628 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CNOT4O95628 FO393414.2-201ENST00000405153 598 ntBASIC14.22□□□□□ -0.13
CNOT4O95628 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.22□□□□□ -0.13
CNOT4O95628 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.22□□□□□ -0.13
CNOT4O95628 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CNOT4O95628 SPDYE12P-201ENST00000618416 771 ntBASIC14.22□□□□□ -0.13
CNOT4O95628 AL590560.3-201ENST00000623350 461 ntBASIC14.22□□□□□ -0.13
CNOT4O95628 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.22□□□□□ -0.13
CNOT4O95628 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.22□□□□□ -0.13
CNOT4O95628 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.22□□□□□ -0.13
CNOT4O95628 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CNOT4O95628 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.22□□□□□ -0.13
CNOT4O95628 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.22□□□□□ -0.13
CNOT4O95628 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.22□□□□□ -0.13
CNOT4O95628 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.22□□□□□ -0.13
CNOT4O95628 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.22□□□□□ -0.13
CNOT4O95628 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CNOT4O95628 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms