Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TRIM3O75382 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 FAM220BP-201ENST00000377689 816 ntBASIC14.95□□□□□ -0.02
TRIM3O75382 HLA-H-201ENST00000383620 1096 ntBASIC14.95□□□□□ -0.02
TRIM3O75382 FAM86GP-201ENST00000448322 971 ntBASIC14.95□□□□□ -0.02
TRIM3O75382 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM3O75382 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.95□□□□□ -0.02
TRIM3O75382 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.95□□□□□ -0.02
TRIM3O75382 AC051619.7-201ENST00000568314 623 ntBASIC14.95□□□□□ -0.02
TRIM3O75382 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM3O75382 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRIM3O75382 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM3O75382 AL662844.4-201ENST00000606367 2838 ntBASIC14.95□□□□□ -0.02
TRIM3O75382 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.95□□□□□ -0.02
TRIM3O75382 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.95□□□□□ -0.02
TRIM3O75382 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 TUBB3P1-201ENST00000405796 1332 ntBASIC14.94□□□□□ -0.02
TRIM3O75382 AC008677.1-201ENST00000519230 1561 ntBASIC14.94□□□□□ -0.02
TRIM3O75382 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM3O75382 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.94□□□□□ -0.02
TRIM3O75382 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.94□□□□□ -0.02
TRIM3O75382 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
TRIM3O75382 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.94□□□□□ -0.02
TRIM3O75382 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRIM3O75382 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.94□□□□□ -0.02
TRIM3O75382 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM3O75382 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM3O75382 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 AC144831.1-201ENST00000573312 2656 ntBASIC14.94□□□□□ -0.02
TRIM3O75382 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TRIM3O75382 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.94□□□□□ -0.02
TRIM3O75382 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM3O75382 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRIM3O75382 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.94□□□□□ -0.02
TRIM3O75382 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TRIM3O75382 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM3O75382 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM3O75382 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM3O75382 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM3O75382 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM3O75382 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM3O75382 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM3O75382 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM3O75382 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
TRIM3O75382 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM3O75382 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.93□□□□□ -0.02
TRIM3O75382 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM3O75382 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM3O75382 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM3O75382 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM3O75382 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM3O75382 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms