Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEF4O60810 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF4O60810 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 AL080243.2-201ENST00000418783 582 ntBASIC15.31■□□□□ 0.04
PRAMEF4O60810 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 AL079307.3-201ENST00000556114 283 ntBASIC15.31■□□□□ 0.04
PRAMEF4O60810 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 Z92544.3-201ENST00000624747 417 ntBASIC15.31■□□□□ 0.04
PRAMEF4O60810 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 AC127383.1-201ENST00000444697 1800 ntBASIC15.31■□□□□ 0.04
PRAMEF4O60810 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF4O60810 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PRAMEF4O60810 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 AL035456.1-201ENST00000456064 1369 ntBASIC15.3■□□□□ 0.04
PRAMEF4O60810 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms