Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PMS2P7-201ENST00000506558 1336 ntBASIC16.22■□□□□ 0.19
RIPK2O43353 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RIPK2O43353 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RIPK2O43353 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.22■□□□□ 0.19
RIPK2O43353 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.22■□□□□ 0.19
RIPK2O43353 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.22■□□□□ 0.19
RIPK2O43353 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.22■□□□□ 0.19
RIPK2O43353 AC092474.2-201ENST00000424288 719 ntBASIC16.22■□□□□ 0.19
RIPK2O43353 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.22■□□□□ 0.19
RIPK2O43353 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.22■□□□□ 0.19
RIPK2O43353 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RIPK2O43353 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.22■□□□□ 0.19
RIPK2O43353 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.22■□□□□ 0.19
RIPK2O43353 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.22■□□□□ 0.19
RIPK2O43353 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.22■□□□□ 0.19
RIPK2O43353 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RIPK2O43353 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
RIPK2O43353 AJ011931.1-201ENST00000618749 2492 ntBASIC16.22■□□□□ 0.19
RIPK2O43353 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RIPK2O43353 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.22■□□□□ 0.19
RIPK2O43353 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.22■□□□□ 0.19
RIPK2O43353 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RIPK2O43353 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.21■□□□□ 0.19
RIPK2O43353 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RIPK2O43353 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RIPK2O43353 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RIPK2O43353 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RIPK2O43353 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RIPK2O43353 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.21■□□□□ 0.19
RIPK2O43353 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RIPK2O43353 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RIPK2O43353 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.21■□□□□ 0.19
RIPK2O43353 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.21■□□□□ 0.19
RIPK2O43353 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RIPK2O43353 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RIPK2O43353 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RIPK2O43353 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.21■□□□□ 0.19
RIPK2O43353 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
RIPK2O43353 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.21■□□□□ 0.19
RIPK2O43353 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.21■□□□□ 0.19
RIPK2O43353 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.21■□□□□ 0.19
RIPK2O43353 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.21■□□□□ 0.19
RIPK2O43353 HNRNPDP1-201ENST00000439535 754 ntBASIC16.21■□□□□ 0.19
RIPK2O43353 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RIPK2O43353 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
RIPK2O43353 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.21■□□□□ 0.19
RIPK2O43353 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.21■□□□□ 0.19
RIPK2O43353 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.21■□□□□ 0.19
RIPK2O43353 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RIPK2O43353 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RIPK2O43353 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RIPK2O43353 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RIPK2O43353 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.21■□□□□ 0.19
RIPK2O43353 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RIPK2O43353 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RIPK2O43353 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.21■□□□□ 0.19
RIPK2O43353 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RIPK2O43353 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.21■□□□□ 0.18
RIPK2O43353 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.21■□□□□ 0.18
RIPK2O43353 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
RIPK2O43353 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
RIPK2O43353 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RIPK2O43353 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
RIPK2O43353 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RIPK2O43353 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.2■□□□□ 0.18
RIPK2O43353 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.2■□□□□ 0.18
RIPK2O43353 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RIPK2O43353 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.2■□□□□ 0.18
RIPK2O43353 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
RIPK2O43353 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms