Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN5O00501 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN5O00501 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN5O00501 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN5O00501 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN5O00501 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN5O00501 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN5O00501 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN5O00501 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN5O00501 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
CLDN5O00501 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN5O00501 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN5O00501 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN5O00501 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN5O00501 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CLDN5O00501 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN5O00501 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN5O00501 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CLDN5O00501 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN5O00501 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.77■□□□□ 0.28
CLDN5O00501 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CLDN5O00501 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CLDN5O00501 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN5O00501 AC136604.1-201ENST00000418535 575 ntBASIC16.77■□□□□ 0.28
CLDN5O00501 AC015922.1-201ENST00000421102 1152 ntBASIC16.77■□□□□ 0.28
CLDN5O00501 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN5O00501 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN5O00501 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.77■□□□□ 0.28
CLDN5O00501 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN5O00501 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN5O00501 API5-211ENST00000534695 560 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN5O00501 TPRX2P-201ENST00000535362 881 ntBASIC16.77■□□□□ 0.28
CLDN5O00501 AC092337.1-201ENST00000568699 1129 ntBASIC16.77■□□□□ 0.28
CLDN5O00501 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN5O00501 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN5O00501 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
CLDN5O00501 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.27
CLDN5O00501 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.77■□□□□ 0.27
CLDN5O00501 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CLDN5O00501 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.77■□□□□ 0.27
CLDN5O00501 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN5O00501 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.77■□□□□ 0.27
CLDN5O00501 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN5O00501 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CLDN5O00501 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.77■□□□□ 0.27
CLDN5O00501 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLDN5O00501 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN5O00501 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN5O00501 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CLDN5O00501 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN5O00501 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN5O00501 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN5O00501 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN5O00501 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CLDN5O00501 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN5O00501 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN5O00501 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN5O00501 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLDN5O00501 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN5O00501 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CLDN5O00501 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN5O00501 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN5O00501 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CLDN5O00501 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN5O00501 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CLDN5O00501 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN5O00501 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN5O00501 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN5O00501 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN5O00501 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN5O00501 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLDN5O00501 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN5O00501 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN5O00501 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLDN5O00501 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN5O00501 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN5O00501 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLDN5O00501 TIMM17BP1-201ENST00000545713 516 ntBASIC16.76■□□□□ 0.27
CLDN5O00501 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
CLDN5O00501 CHCHD2P3-201ENST00000603038 451 ntBASIC16.76■□□□□ 0.27
CLDN5O00501 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN5O00501 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.76■□□□□ 0.27
CLDN5O00501 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CLDN5O00501 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CLDN5O00501 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLDN5O00501 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN5O00501 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN5O00501 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN5O00501 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CLDN5O00501 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN5O00501 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN5O00501 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN5O00501 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN5O00501 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN5O00501 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN5O00501 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN5O00501 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN5O00501 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN5O00501 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN5O00501 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms