Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PIK3C2AO00443 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC20.91■□□□□ 0.94
PIK3C2AO00443 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC20.91■□□□□ 0.94
PIK3C2AO00443 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PIK3C2AO00443 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
PIK3C2AO00443 AL596087.1-201ENST00000400979 1969 ntBASIC20.91■□□□□ 0.94
PIK3C2AO00443 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PIK3C2AO00443 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PIK3C2AO00443 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
PIK3C2AO00443 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PIK3C2AO00443 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PIK3C2AO00443 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PIK3C2AO00443 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.91■□□□□ 0.94
PIK3C2AO00443 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PIK3C2AO00443 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.9■□□□□ 0.94
PIK3C2AO00443 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PIK3C2AO00443 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
PIK3C2AO00443 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PIK3C2AO00443 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PIK3C2AO00443 AL158070.2-201ENST00000623713 1621 ntBASIC20.9■□□□□ 0.94
PIK3C2AO00443 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PIK3C2AO00443 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC20.9■□□□□ 0.94
PIK3C2AO00443 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PIK3C2AO00443 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC20.9■□□□□ 0.94
PIK3C2AO00443 REEP1-202ENST00000453231 940 ntTSL 2 BASIC20.9■□□□□ 0.94
PIK3C2AO00443 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC20.9■□□□□ 0.94
PIK3C2AO00443 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
PIK3C2AO00443 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PIK3C2AO00443 AC132938.4-201ENST00000623835 848 ntBASIC20.9■□□□□ 0.94
PIK3C2AO00443 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PIK3C2AO00443 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PIK3C2AO00443 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PIK3C2AO00443 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PIK3C2AO00443 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PIK3C2AO00443 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PIK3C2AO00443 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PIK3C2AO00443 LINC02447-202ENST00000501888 2146 ntBASIC20.9■□□□□ 0.94
PIK3C2AO00443 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PIK3C2AO00443 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PIK3C2AO00443 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PIK3C2AO00443 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC20.9■□□□□ 0.94
PIK3C2AO00443 AMT-224ENST00000635808 1610 ntTSL 5 BASIC20.9■□□□□ 0.94
PIK3C2AO00443 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PIK3C2AO00443 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PIK3C2AO00443 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PIK3C2AO00443 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
PIK3C2AO00443 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
PIK3C2AO00443 AC079178.1-201ENST00000420915 656 ntBASIC20.89■□□□□ 0.94
PIK3C2AO00443 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC20.89■□□□□ 0.94
PIK3C2AO00443 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC20.89■□□□□ 0.94
PIK3C2AO00443 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PIK3C2AO00443 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC20.89■□□□□ 0.94
PIK3C2AO00443 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PIK3C2AO00443 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PIK3C2AO00443 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PIK3C2AO00443 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PIK3C2AO00443 AD000864.1-201ENST00000624076 2295 ntBASIC20.89■□□□□ 0.93
PIK3C2AO00443 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PIK3C2AO00443 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PIK3C2AO00443 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PIK3C2AO00443 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC20.89■□□□□ 0.93
PIK3C2AO00443 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PIK3C2AO00443 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PIK3C2AO00443 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PIK3C2AO00443 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PIK3C2AO00443 SNX21-203ENST00000372541 771 ntTSL 2 BASIC20.89■□□□□ 0.93
PIK3C2AO00443 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PIK3C2AO00443 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
PIK3C2AO00443 PARP8-218ENST00000513738 596 ntTSL 4 BASIC20.89■□□□□ 0.93
PIK3C2AO00443 AC005730.2-201ENST00000564549 1184 ntBASIC20.89■□□□□ 0.93
PIK3C2AO00443 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC20.89■□□□□ 0.93
PIK3C2AO00443 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC20.89■□□□□ 0.93
PIK3C2AO00443 AL645728.2-202ENST00000641679 227 ntBASIC20.89■□□□□ 0.93
PIK3C2AO00443 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PIK3C2AO00443 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC20.88■□□□□ 0.93
PIK3C2AO00443 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PIK3C2AO00443 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PIK3C2AO00443 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.88■□□□□ 0.93
PIK3C2AO00443 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PIK3C2AO00443 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PIK3C2AO00443 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PIK3C2AO00443 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC20.88■□□□□ 0.93
PIK3C2AO00443 KRTAP10-13P-201ENST00000412914 571 ntBASIC20.88■□□□□ 0.93
PIK3C2AO00443 CD8B2-202ENST00000417670 633 ntBASIC20.88■□□□□ 0.93
PIK3C2AO00443 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PIK3C2AO00443 NEU3-202ENST00000526068 431 ntTSL 2 BASIC20.88■□□□□ 0.93
PIK3C2AO00443 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC20.88■□□□□ 0.93
PIK3C2AO00443 ENPP7P14-201ENST00000621765 1040 ntBASIC20.88■□□□□ 0.93
PIK3C2AO00443 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC20.88■□□□□ 0.93
PIK3C2AO00443 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC20.88■□□□□ 0.93
PIK3C2AO00443 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PIK3C2AO00443 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PIK3C2AO00443 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PIK3C2AO00443 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PIK3C2AO00443 AC084364.1-201ENST00000551967 1556 ntBASIC20.88■□□□□ 0.93
PIK3C2AO00443 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.88■□□□□ 0.93
PIK3C2AO00443 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PIK3C2AO00443 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PIK3C2AO00443 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.88■□□□□ 0.93
PIK3C2AO00443 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms