Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.39□□□□□ -0.27
TRBV6-7A0A0A0MS04 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-7A0A0A0MS04 AC090616.6-203ENST00000579186 1945 ntBASIC13.39□□□□□ -0.27
TRBV6-7A0A0A0MS04 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
TRBV6-7A0A0A0MS04 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.39□□□□□ -0.27
TRBV6-7A0A0A0MS04 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TRBV6-7A0A0A0MS04 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-7A0A0A0MS04 PMS2P7-201ENST00000506558 1336 ntBASIC13.39□□□□□ -0.27
TRBV6-7A0A0A0MS04 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 IGHV3-22-201ENST00000520721 359 ntBASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 AC104692.2-201ENST00000603054 253 ntBASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 AC105250.1-201ENST00000509378 2057 ntBASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-7A0A0A0MS04 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 MROH4P-201ENST00000431302 1578 ntBASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 AC091951.1-201ENST00000512854 2465 ntBASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 GPX1P2-201ENST00000429271 606 ntBASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV6-7A0A0A0MS04 AC079776.4-201ENST00000511039 504 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms