Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 HMGN1P19-201ENST00000436976 333 ntBASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 RN7SL618P-201ENST00000477850 296 ntBASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 RNA5SP421-201ENST00000516864 134 ntBASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 AL450472.2-201ENST00000603663 1156 ntBASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 AC012183.1-201ENST00000625197 499 ntBASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGC4Q9Y5F7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 INGX-202ENST00000489074 768 ntBASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 AC009407.1-201ENST00000568958 598 ntBASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC4Q9Y5F7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHGC4Q9Y5F7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGC4Q9Y5F7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PCDHGC4Q9Y5F7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGC4Q9Y5F7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGC4Q9Y5F7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGC4Q9Y5F7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGC4Q9Y5F7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHGC4Q9Y5F7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.08■□□□□ 0.17
PCDHGC4Q9Y5F7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGC4Q9Y5F7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 AC132872.4-202ENST00000622924 2756 ntBASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 UGT1A2P-201ENST00000454886 866 ntBASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 HYMAI-201ENST00000635591 3347 ntBASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms