Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AC117489.1-201ENST00000625169 3217 ntBASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.39■□□□□ 0.54
R3HCC1Q9Y3T6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
R3HCC1Q9Y3T6 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
R3HCC1Q9Y3T6 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
R3HCC1Q9Y3T6 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
R3HCC1Q9Y3T6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 AC136621.1-201ENST00000624017 2304 ntBASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 MED15P5-201ENST00000423150 992 ntBASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 PMS2P1-201ENST00000431037 1228 ntBASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 VN2R19P-201ENST00000442399 1052 ntBASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 AP002490.2-201ENST00000524791 560 ntBASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
R3HCC1Q9Y3T6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 PAWRP1-201ENST00000451083 565 ntBASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 AC034105.1-201ENST00000563488 319 ntBASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 AC129492.6-201ENST00000611383 1305 ntBASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
R3HCC1Q9Y3T6 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 AC087163.2-201ENST00000457299 853 ntBASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms