Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 ATP6V0CP3-201ENST00000417255 467 ntBASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 AF238378.1-201ENST00000526806 358 ntBASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 LINC01711-201ENST00000598340 967 ntBASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 AC008735.5-201ENST00000623544 497 ntBASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 WASH6P-202ENST00000359512 1437 ntBASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 AL589702.1-201ENST00000641229 1509 ntBASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 AL513480.1-201ENST00000451731 511 ntBASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 AC105339.3-201ENST00000560043 636 ntBASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 CICP23-201ENST00000605013 2741 ntBASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
UBE2D4Q9Y2X8 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms