Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 ME2P1-201ENST00000426028 1970 ntBASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIP2Q9UDT6 REXO1L8P-201ENST00000604378 1897 ntBASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 AL136982.4-201ENST00000437689 1740 ntBASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 MST1L-201ENST00000442552 2185 ntBASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 SPDYE17-201ENST00000412399 783 ntBASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 AL512361.1-201ENST00000554200 418 ntBASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.94■□□□□ 0.62
CLIP2Q9UDT6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 AC009118.2-201ENST00000613275 655 ntBASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 AC004840.1-201ENST00000636359 365 ntBASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIP2Q9UDT6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLIP2Q9UDT6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms