Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 AC004890.2-204ENST00000481968 304 ntBASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 AC044860.1-202ENST00000559481 777 ntBASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 AC009407.1-201ENST00000568958 598 ntBASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 AC105917.1-201ENST00000506637 2539 ntBASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
ECHDC1Q9NTX5 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 BASP1P1-201ENST00000430708 665 ntBASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 AC093214.1-201ENST00000511688 1107 ntBASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 SDHAP3-202ENST00000515467 728 ntBASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.36■□□□□ 0.69
ECHDC1Q9NTX5 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms