Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 AL671277.1-201ENST00000429656 993 ntBASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 AC092902.6-201ENST00000641783 218 ntBASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB1Q9H4B7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 FAM220BP-201ENST00000377689 816 ntBASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 AL590627.1-203ENST00000421194 1026 ntBASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 FDX1P1-201ENST00000449115 551 ntBASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 KRT18P3-201ENST00000451602 1288 ntBASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 RNA5SP416-201ENST00000516838 111 ntBASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 AC243562.1-201ENST00000560672 389 ntBASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB1Q9H4B7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TUBB1Q9H4B7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.37■□□□□ 0.05
TUBB1Q9H4B7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TUBB1Q9H4B7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TUBB1Q9H4B7 ZNF259P1-201ENST00000407656 1365 ntBASIC15.37■□□□□ 0.05
TUBB1Q9H4B7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TUBB1Q9H4B7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TUBB1Q9H4B7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TUBB1Q9H4B7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TUBB1Q9H4B7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TUBB1Q9H4B7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TUBB1Q9H4B7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TUBB1Q9H4B7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TUBB1Q9H4B7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.37■□□□□ 0.05
TUBB1Q9H4B7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms