Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 AC025580.3-201ENST00000617932 1424 ntBASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
POLR2J3Q9H1A7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 AL109954.1-202ENST00000564051 2148 ntBASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 AC024267.1-201ENST00000582320 895 ntBASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 AC073389.1-201ENST00000595595 795 ntBASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 AC064836.3-201ENST00000607928 673 ntBASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
POLR2J3Q9H1A7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 GPX1P2-201ENST00000429271 606 ntBASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 KRT126P-201ENST00000549467 1181 ntBASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 HLA-A-201ENST00000376802 1334 ntBASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 MYO15B-237ENST00000642007 4893 ntBASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.8□□□□□ -0.04
POLR2J3Q9H1A7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms