Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
RAB40CQ96S21 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
RAB40CQ96S21 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13□□□□□ -0.33
RAB40CQ96S21 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13□□□□□ -0.33
RAB40CQ96S21 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RAB40CQ96S21 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
RAB40CQ96S21 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13□□□□□ -0.33
RAB40CQ96S21 AL390755.1-201ENST00000623716 2027 ntBASIC13□□□□□ -0.33
RAB40CQ96S21 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13□□□□□ -0.33
RAB40CQ96S21 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13□□□□□ -0.33
RAB40CQ96S21 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
RAB40CQ96S21 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
RAB40CQ96S21 AC126365.1-201ENST00000578585 1514 ntBASIC13□□□□□ -0.33
RAB40CQ96S21 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RAB40CQ96S21 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RAB40CQ96S21 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13□□□□□ -0.33
RAB40CQ96S21 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13□□□□□ -0.33
RAB40CQ96S21 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13□□□□□ -0.33
RAB40CQ96S21 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13□□□□□ -0.33
RAB40CQ96S21 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13□□□□□ -0.33
RAB40CQ96S21 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13□□□□□ -0.33
RAB40CQ96S21 PRELID1P1-202ENST00000567272 903 ntBASIC13□□□□□ -0.33
RAB40CQ96S21 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13□□□□□ -0.33
RAB40CQ96S21 MIR3909-201ENST00000579518 119 ntBASIC13□□□□□ -0.33
RAB40CQ96S21 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13□□□□□ -0.33
RAB40CQ96S21 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13□□□□□ -0.33
RAB40CQ96S21 AL121772.3-201ENST00000610840 674 ntBASIC13□□□□□ -0.33
RAB40CQ96S21 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RAB40CQ96S21 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13□□□□□ -0.33
RAB40CQ96S21 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13□□□□□ -0.33
RAB40CQ96S21 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13□□□□□ -0.33
RAB40CQ96S21 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RAB40CQ96S21 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
RAB40CQ96S21 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms