Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSPG4P5Q96PW8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 AC092384.3-202ENST00000564646 2873 ntBASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSPG4P5Q96PW8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 AC105250.1-201ENST00000509378 2057 ntBASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 FO393414.2-201ENST00000405153 598 ntBASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 AC136604.1-201ENST00000418535 575 ntBASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 AL080243.2-201ENST00000418783 582 ntBASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 CNN2P2-201ENST00000443536 909 ntBASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 CNN2P3-201ENST00000450201 906 ntBASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 AL589739.1-201ENST00000607720 493 ntBASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 AL136317.3-201ENST00000618497 906 ntBASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSPG4P5Q96PW8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG4P5Q96PW8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG4P5Q96PW8 CETN4P-206ENST00000642099 2168 ntBASIC16.41■□□□□ 0.22
CSPG4P5Q96PW8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG4P5Q96PW8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG4P5Q96PW8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CSPG4P5Q96PW8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG4P5Q96PW8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSPG4P5Q96PW8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms