Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
DDX11Q96FC9 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19■□□□□ 0.63
DDX11Q96FC9 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19■□□□□ 0.63
DDX11Q96FC9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
DDX11Q96FC9 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
DDX11Q96FC9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19■□□□□ 0.63
DDX11Q96FC9 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 NFIC-211ENST00000641145 8399 ntBASIC19■□□□□ 0.63
DDX11Q96FC9 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19■□□□□ 0.63
DDX11Q96FC9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19■□□□□ 0.63
DDX11Q96FC9 AC092580.3-201ENST00000430932 139 ntBASIC19■□□□□ 0.63
DDX11Q96FC9 AC241585.1-201ENST00000433527 519 ntBASIC19■□□□□ 0.63
DDX11Q96FC9 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19■□□□□ 0.63
DDX11Q96FC9 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19■□□□□ 0.63
DDX11Q96FC9 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19■□□□□ 0.63
DDX11Q96FC9 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19■□□□□ 0.63
DDX11Q96FC9 AC008761.3-201ENST00000624803 892 ntBASIC19■□□□□ 0.63
DDX11Q96FC9 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
DDX11Q96FC9 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
DDX11Q96FC9 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19■□□□□ 0.63
DDX11Q96FC9 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
DDX11Q96FC9 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
DDX11Q96FC9 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
DDX11Q96FC9 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19■□□□□ 0.63
DDX11Q96FC9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19■□□□□ 0.63
DDX11Q96FC9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX11Q96FC9 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.99■□□□□ 0.63
DDX11Q96FC9 TSPY26P-202ENST00000565928 3884 ntBASIC18.99■□□□□ 0.63
DDX11Q96FC9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
DDX11Q96FC9 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
DDX11Q96FC9 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.99■□□□□ 0.63
DDX11Q96FC9 MIR648-201ENST00000385046 94 ntBASIC18.99■□□□□ 0.63
DDX11Q96FC9 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.99■□□□□ 0.63
DDX11Q96FC9 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.99■□□□□ 0.63
DDX11Q96FC9 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.99■□□□□ 0.63
DDX11Q96FC9 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
DDX11Q96FC9 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX11Q96FC9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX11Q96FC9 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.99■□□□□ 0.63
DDX11Q96FC9 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX11Q96FC9 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX11Q96FC9 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX11Q96FC9 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX11Q96FC9 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
DDX11Q96FC9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX11Q96FC9 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
DDX11Q96FC9 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
DDX11Q96FC9 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX11Q96FC9 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX11Q96FC9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX11Q96FC9 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.98■□□□□ 0.63
DDX11Q96FC9 PRYP6-201ENST00000514804 343 ntBASIC18.98■□□□□ 0.63
DDX11Q96FC9 AC073389.1-201ENST00000595595 795 ntBASIC18.98■□□□□ 0.63
DDX11Q96FC9 AC073592.8-201ENST00000624126 511 ntBASIC18.98■□□□□ 0.63
DDX11Q96FC9 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX11Q96FC9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms