Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CFAP61Q8NHU2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CFAP61Q8NHU2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CFAP61Q8NHU2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CFAP61Q8NHU2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CFAP61Q8NHU2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.27■□□□□ 0.2
CFAP61Q8NHU2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CFAP61Q8NHU2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.27■□□□□ 0.2
CFAP61Q8NHU2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CFAP61Q8NHU2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CFAP61Q8NHU2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.27■□□□□ 0.2
CFAP61Q8NHU2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.27■□□□□ 0.2
CFAP61Q8NHU2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.27■□□□□ 0.2
CFAP61Q8NHU2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CFAP61Q8NHU2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CFAP61Q8NHU2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.27■□□□□ 0.2
CFAP61Q8NHU2 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.27■□□□□ 0.2
CFAP61Q8NHU2 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CFAP61Q8NHU2 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
CFAP61Q8NHU2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CFAP61Q8NHU2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.27■□□□□ 0.19
CFAP61Q8NHU2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CFAP61Q8NHU2 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.27■□□□□ 0.19
CFAP61Q8NHU2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.27■□□□□ 0.19
CFAP61Q8NHU2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CFAP61Q8NHU2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CFAP61Q8NHU2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
CFAP61Q8NHU2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CFAP61Q8NHU2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CFAP61Q8NHU2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.27■□□□□ 0.19
CFAP61Q8NHU2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CFAP61Q8NHU2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 PMS2P4-201ENST00000412466 1052 ntBASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 AC140658.5-201ENST00000438532 169 ntBASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 AL009183.1-201ENST00000603760 355 ntBASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 PPT1-215ENST00000641471 2368 ntBASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFAP61Q8NHU2 MYO15B-237ENST00000642007 4893 ntBASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CFAP61Q8NHU2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms