Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 CRYGEP-201ENST00000412192 528 ntBASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 AC002076.1-201ENST00000435257 527 ntTSL 2 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 AC122713.1-201ENST00000518368 1015 ntBASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 AC104072.1-201ENST00000568817 668 ntBASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 AP001099.1-201ENST00000579385 855 ntTSL 5 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 AC025165.5-201ENST00000602802 578 ntBASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 AP002371.2-201ENST00000624450 503 ntBASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EFCAB3Q8N7B9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 AC106028.4-201ENST00000614509 607 ntBASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 CU638689.4-208ENST00000623324 936 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 CU634019.6-203ENST00000624728 936 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 AL732372.1-203ENST00000635159 994 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.11■□□□□ 0.17
EFCAB3Q8N7B9 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 AL354892.3-201ENST00000586101 1630 ntBASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 MIR770-201ENST00000390219 98 ntBASIC16.1■□□□□ 0.17
EFCAB3Q8N7B9 CDC23-201ENST00000394884 1079 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms